分支 · HPCSource / gatk · 极狐GitLab

lb_jenkins_cromwell

d767d03d · adding basic scripts to poke cromwell from jenkins · 3月 22, 2016
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ak_lsf_111

2f8430fd · bump to LFS 1.1.1 that fixes a race condition that hurt us · 3月 16, 2016
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ak_variantQC

0c6f82d9 · DP and GQ stats, per genotype · 3月 07, 2016
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ak_GenotypeGVCFs

7bb91b9b · work in progress · 3月 04, 2016
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ak_gvcf_parquet

f8549b6e · fixes · 2月 24, 2016
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tw_sharded_bam_reader

e96bf4d8 · Initial sketch of a sharded SamReader implementation (#1409). · 2月 23, 2016
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ak_GenotypingEngine_part2

0888d7b9 · originals · 2月 17, 2016
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cw_clusterize_sv_spark_tools

f2b3baec · updates to algorithm · 2月 16, 2016
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cww_expl_sv_read_gathering_tools_spark

50666e4f · exploratory tools for gathering SV-related read pairs · 2月 11, 2016
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dr_rcm_review

2204787f · ReferenceConfidenceModel and tests · 2月 11, 2016
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dr_fix_sam_comparator_race

5b370801 · print num partitions · 12月 08, 2015
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da_remove_md_bqsr

2f9c1b85 · Staring compare duplicates · 11月 20, 2015
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da_compare_md

c3ba1f54 · Removing some dead code. · 11月 16, 2015
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ak_bqsr_removeIndels

b13d9c82 · Merge pull request #1114 from broadinstitute/ak_baserecalibrator_speedup · 11月 13, 2015
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da_key_bug

96e8d414 · Adding a little more code to find the bad record. · 11月 06, 2015
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da_bqsr_qs_diff

5dfcea8c · A start. · 11月 05, 2015
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da_md_unit_tests

6a29c195 · Adding a little more to the unit tests. · 11月 02, 2015
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ak_coverage_spark

f2e7c020 · use reduceByKey · 10月 26, 2015
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dr_disable_lexicographic_order_check_for_variants

5780c0db · Disable the lexicographic ordering check for variant sequence dictionaries · 10月 23, 2015
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tw_debug_invalid_bam

3d3dde98 · Invalid BAM · 10月 20, 2015
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