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4.0.4.0

7641f534 · MarkDuplicatesSpark improvements checkpoint (#4656) · 4月 26, 2018
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4.0.4.0 release
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4.0.3.0

6979f376 · Add CNNScoreVariants with 2D model, CNNVariantTrain, CNNVariantWriteTensors... · 3月 27, 2018
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GATK 4.0.3.0
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4.0.2.1

8a787902 · HaplotypeCaller: fix -contamination argument, and add tests (#4455) · 3月 02, 2018
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4.0.2.1 release
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4.0.2.0

2bb2f509 · adding missing registrations in kryo (#4451) · 2月 26, 2018
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4.0.2.0
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4.0.1.2

dbea0da6 · Passing vcf indices correctly in M2 wdls (#4381) · 2月 08, 2018
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4.0.1.2 release
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4.0.1.1

390274b3 · Fixed GatherTranches -- gathered tranches should be closer to target truth... · 2月 01, 2018
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4.0.1.1 release
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4.0.1.0

d6e76358 · prevent users from requesting g.vcf.gz in Spark (#4277) · 1月 30, 2018
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4.0.1.0 release
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4.0.0.0

1418c4a9 · updating to use our google-cloud-nio build from central (#4108) · 1月 09, 2018
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4.0.0.0 release
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4.beta.6

fd8749d0 · Dump more evidence info for SV pipeline debugging (#3691) · 10月 16, 2017
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Release 4.beta.6
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4.beta.5

0ef81ef5 · Make directory name unique for BucketUtilsTest#testDirSizeGCS to avoid... · 9月 06, 2017
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4.beta.5
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4.beta.4

38707bf4 · Remove extra .gitattributes file that got checked into large via an SV PR (#3522) · 8月 25, 2017
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4.beta.4 release
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4.beta.3

b49f1c41 · documentation for new contamination tool (#3263) · 7月 25, 2017
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4.beta.3 release
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4.beta.2

a21447fb · Fixing hash collision issue when adding filter value to the variant context (#3305) · 7月 19, 2017
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Release 4.beta.2
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4.beta.1

c43f93e0 · Starting to move to oncotator MAF instead of VCF (#3145) · 6月 28, 2017
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4.beta.1 release
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4.alpha.2

1e03bdcf · updating to htsjdk 2.5.0 -> 2.6.0 (#2100) · 8月 17, 2016
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GATK-4 alpha 2 release
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4.alpha.1

99fca37d · Merge pull request #1785 from broadinstitute/lb_fix_indelDeflaterOnDataproc · 4月 29, 2016
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GATK 4 alpha-1 milestone complete
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broad-production-1

7df40446 · Merge pull request #1670 from broadinstitute/dr_unmapped_interval_support · 3月 30, 2016
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First version used by Broad production
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4.alpha

3baf5413 · Merge pull request #1360 from broadinstitute/dr_adjust_gradle_clean_readme · 12月 11, 2015
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GATK 4 alpha
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4.alpha.rc1

97024113 · Merge pull request #1279 from broadinstitute/dr_fix_readsparksink_ordering_bug · 12月 08, 2015
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GATK 4.alpha.rc1
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4.pre-alpha

386e20ad · Merge pull request #992 from broadinstitute/lb_expose_test_files_for_dataflow · 10月 09, 2015
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Pre-alpha version of GATK4
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