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Created with Raphaël 2.2.025Nov2420141253229Oct2523201098765230Sep292822425Aug10328Jul271816432129Jun252219161412111096318May532130Apr2827221716151097654330Mar292624232221181583229Feb281917141123Jan211815976231Dec3029272619181514627Nov22201918119643131Oct302822212016118432129Sep272524232018178765431Aug292827262322212019171613125331Jul28251714131098654326Jun2421201917131211873230May28272625242120310Apr986543220Mar18171613875422Feb161513128543130Jan28262523222119181716151312118653231Dec[ci skip] update READMEMerge branch 'develop'[ci skip] update READMEMerge branch 'develop'[ci skip] update READMErely on tagged version of pufferfishadd extra new line at end of library type detection messageok, it workswe are pulling from puff developCreate 1.4.0pull from developbump versionadd extra long option names for rad file generation and sketch modeMove default consensus slack to SalmonDefaultsmessagemessagefix archattempt to detect host archMerge branch 'develop' of github.com:COMBINE-lab/salmon into developprepare for upstream use of simdealigning the develop with masterMerge pull request #583 from Gaura/patch-2Merge pull request #577 from Wytamma/patch-1minor typorst bscorrecting typosMerge branch 'develop' of github.com:COMBINE-lab/salmon into developmodifying doc and correcting a logging bugUpdate README.mdAdd files via uploadFixed spelling of ArabidopsisMerge branch 'develop' of github.com:COMBINE-lab/salmon into developClean up some config, extra consistency checks.Merge pull request #548 from mr-c/spellingMerge pull request #568 from Gaura/patch-1custom read geometry allowed as wellallow tag geometry to contain 'end'update storage type for tag sliceschange interface for extractBarcodeinitial implementation of new custom tag geometry