- now reads from stdin if -q is skipped - fixes for increasing stability - updates and fixes for mapping ultra-long nanopore reads (https://github.com/nickloman/massive-nanopore-silliness) - Parameter --bam-fix added. Currently, BAM does not support reads with > 64k cigar elements. When --bam-fix is set all reads with >64k Cigar elements will be reported as unmapped to maintain compatibility with BAM